Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cdp-glucose 4,6-dehydratase | HSERO_RS22040 | Not Available | Positive | 5039084 - 5040157 | 39772.9 |
| udp-glucose 4-epimerase gale | HSERO_RS22045 | Not Available | Positive | 5040212 - 5041222 | 36718.0 |
| dtdp-glucose 4,6-dehydratase | HSERO_RS22050 | Not Available | Positive | 5041237 - 5042253 | 37016.6 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | HSERO_RS22055 | Not Available | Positive | 5042250 - 5042795 | 20640.4 |
| hypothetical protein | HSERO_RS24975 | Not Available | Positive | 5043081 - 5043251 | 6005.4 |
| kinase | HSERO_RS22060 | Not Available | Positive | 5043316 - 5044314 | 37007.4 |
| gdp-l-fucose synthase family protein | HSERO_RS22065 | Not Available | Positive | 5044314 - 5045303 | 35736.0 |
| degt/dnrj/eryc1/strs family aminotransferase | HSERO_RS22070 | Not Available | Positive | 5045388 - 5046542 | 43631.8 |
| sugar phosphate nucleotidyltransferase | HSERO_RS22075 | Not Available | Positive | 5046546 - 5047268 | 26010.0 |
| d-sedoheptulose-7-phosphate isomerase | HSERO_RS22080 | Not Available | Positive | 5047265 - 5047852 | 20530.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


