Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ii 3-dehydroquinate dehydratase | HSERO_RS01935 | Not Available | Negative | 425391 - 425828 | 15724.8 |
| tlpa family protein disulfide reductase | HSERO_RS01940 | Not Available | Negative | 425925 - 426446 | 18910.1 |
| hypothetical protein | HSERO_RS01945 | Not Available | Negative | 426446 - 427087 | 23678.8 |
| helix-turn-helix transcriptional regulator | HSERO_RS01950 | Not Available | Negative | 427128 - 428051 | 34000.3 |
| methyl-accepting chemotaxis protein | HSERO_RS01955 | Not Available | Positive | 428446 - 430149 | 59689.9 |
| hypothetical protein | HSERO_RS01960 | Not Available | Positive | 430157 - 430480 | 11977.2 |
| udp-n-acetylmuramate:l-alanyl-gamma-d-glutamyl- meso-diaminopimelate ligase | HSERO_RS01965 | Not Available | Positive | 430556 - 431938 | 48989.7 |
| yqia/ycfp family alpha/beta fold hydrolase | HSERO_RS01970 | Not Available | Positive | 431935 - 432525 | 21585.9 |
| chorismate--pyruvate lyase family protein | HSERO_RS01975 | Not Available | Positive | 432525 - 433130 | 22003.1 |
| ribonuclease catalytic domain-containing protein | HSERO_RS01980 | Not Available | Positive | 433147 - 435201 | 75044.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


