Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| class i sam-dependent methyltransferase | HSERO_RS21995 | Not Available | Negative | 5030969 - 5032129 | 41832.0 |
| sdr family oxidoreductase | HSERO_RS22000 | Not Available | Positive | 5032202 - 5032969 | 26963.3 |
| dihydroneopterin aldolase | HSERO_RS22005 | Not Available | Positive | 5032987 - 5033382 | 15059.2 |
| type ii toxin-antitoxin system higb family toxin | HSERO_RS22010 | Not Available | Positive | 5033509 - 5033802 | 11279.5 |
| helix-turn-helix domain-containing protein | HSERO_RS22015 | Not Available | Positive | 5033820 - 5034212 | 14716.9 |
| yitt family protein | HSERO_RS22020 | Not Available | Negative | 5034299 - 5034931 | 22686.6 |
| aromatic amino acid transaminase | HSERO_RS22025 | Not Available | Negative | 5034924 - 5036114 | 43572.4 |
| hypothetical protein | HSERO_RS24970 | Not Available | Negative | 5036211 - 5036561 | 12966.0 |
| lysr family transcriptional regulator | HSERO_RS22030 | Not Available | Positive | 5036592 - 5037515 | 33455.6 |
| trna 2-thiocytidine(32) synthetase ttca | HSERO_RS22035 | Not Available | Positive | 5037693 - 5038655 | 35744.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


