Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS21945 | Not Available | Negative | 5021619 - 5022050 | 15359.7 |
| phage holin family protein | HSERO_RS21950 | Not Available | Negative | 5022072 - 5022479 | 14575.4 |
| duf883 family protein | HSERO_RS21955 | Not Available | Negative | 5022491 - 5022799 | 10598.7 |
| gamma-glutamyl-gamma-aminobutyrate hydrolase | HSERO_RS21960 | Not Available | Negative | 5023021 - 5024157 | 40823.2 |
| nad(p)h-dependent oxidoreductase | HSERO_RS21965 | Not Available | Positive | 5024451 - 5024972 | 19887.8 |
| glutathione-regulated potassium-efflux system protein kefc | HSERO_RS21970 | Not Available | Positive | 5025042 - 5026862 | 65982.1 |
| degq family serine endoprotease | HSERO_RS21975 | Not Available | Negative | 5027060 - 5028544 | 51500.7 |
| atp-binding protein | HSERO_RS21980 | Not Available | Negative | 5028754 - 5030088 | 48016.7 |
| response regulator | HSERO_RS21985 | Not Available | Negative | 5030085 - 5030741 | 24014.0 |
| duf2905 domain-containing protein | HSERO_RS21990 | Not Available | Negative | 5030764 - 5030958 | 7316.57 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


