Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| tetratricopeptide repeat protein | HSERO_RS21890 | Not Available | Negative | 5010640 - 5011392 | 27751.0 |
| tonb-dependent receptor | HSERO_RS21895 | Not Available | Negative | 5011401 - 5013797 | 85828.1 |
| response regulator | HSERO_RS21900 | Not Available | Positive | 5014046 - 5014768 | 27280.2 |
| atp-binding protein | HSERO_RS21905 | Not Available | Positive | 5014765 - 5016204 | 52896.9 |
| abc transporter atp-binding protein | HSERO_RS21910 | Not Available | Negative | 5016191 - 5016982 | 28309.5 |
| feccd family abc transporter permease | HSERO_RS21915 | Not Available | Negative | 5017063 - 5018157 | 38338.3 |
| abc transporter substrate-binding protein | HSERO_RS21920 | Not Available | Negative | 5018154 - 5019233 | 39073.2 |
| Trna-arg | Not Available | Not Available | Positive | 5019752 - 5019827 | Not Available |
| c-type cytochrome | HSERO_RS21935 | Not Available | Positive | 5020061 - 5020630 | 19483.2 |
| ompa family protein | HSERO_RS21940 | Not Available | Negative | 5020734 - 5021459 | 24715.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


