Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| atp synthase subunit i | HSERO_RS21840 | Not Available | Negative | 4999816 - 5000160 | 12544.1 |
| hd domain-containing phosphohydrolase | HSERO_RS21845 | Not Available | Negative | 5000720 - 5002177 | 51181.7 |
| alpha/beta hydrolase | HSERO_RS21850 | Not Available | Positive | 5002396 - 5003181 | 26672.0 |
| dtdp-4-dehydrorhamnose reductase | HSERO_RS21855 | Not Available | Negative | 5003226 - 5004164 | 33771.3 |
| lysr family transcriptional regulator | HSERO_RS21860 | Not Available | Negative | 5004343 - 5005263 | 33455.2 |
| mfs transporter | HSERO_RS21865 | Not Available | Positive | 5005449 - 5006663 | 44089.2 |
| amidase | HSERO_RS21870 | Not Available | Positive | 5006683 - 5008203 | 54017.7 |
| rida family protein | HSERO_RS21875 | Not Available | Positive | 5008274 - 5008624 | 12328.9 |
| nad(p)/fad-dependent oxidoreductase | HSERO_RS21880 | Not Available | Positive | 5008646 - 5009785 | 40534.6 |
| fe2+-dependent dioxygenase | HSERO_RS21885 | Not Available | Negative | 5009960 - 5010643 | 25720.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


