Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| methionine synthase | HSERO_RS21740 | Not Available | Negative | 4976550 - 4980293 | 137685.0 |
| 5'-methylthioadenosine nucleosidase | HSERO_RS21745 | Not Available | Positive | 4980493 - 4981077 | 21044.2 |
| methionyl-trna formyltransferase | HSERO_RS21750 | Not Available | Negative | 4981098 - 4982051 | 33605.8 |
| sdr family oxidoreductase | HSERO_RS21755 | Not Available | Negative | 4982085 - 4982891 | 28790.2 |
| thiol:disulfide interchange protein dsba/dsbl | HSERO_RS21760 | Not Available | Negative | 4982989 - 4983678 | 25264.3 |
| spor domain-containing protein | HSERO_RS21765 | Not Available | Negative | 4983786 - 4984445 | 23076.5 |
| arginine--trna ligase | HSERO_RS21770 | Not Available | Negative | 4984467 - 4986200 | 62820.4 |
| primosomal protein n' | HSERO_RS21775 | Not Available | Negative | 4986412 - 4988538 | 77801.2 |
| uroporphyrinogen decarboxylase | HSERO_RS21780 | Not Available | Negative | 4989255 - 4990334 | 39275.2 |
| transporter substrate-binding domain-containing protein | HSERO_RS21785 | Not Available | Positive | 4990593 - 4991396 | 29571.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


