Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| l-2-hydroxyglutarate oxidase | HSERO_RS21645 | Not Available | Negative | 4955150 - 4956358 | 44566.4 |
| tetr/acrr family transcriptional regulator | HSERO_RS21650 | Not Available | Negative | 4956437 - 4957069 | 22798.5 |
| elongation factor g | HSERO_RS21655 | Not Available | Positive | 4957320 - 4959425 | 77706.2 |
| Trna-asp | Not Available | Not Available | Positive | 4959633 - 4959709 | Not Available |
| nitroreductase family protein | HSERO_RS21665 | Not Available | Negative | 4959820 - 4960413 | 21647.7 |
| trna uridine-5-carboxymethylaminomethyl(34) synthesis gtpase mnme | HSERO_RS21670 | Not Available | Negative | 4960704 - 4962104 | 49905.5 |
| membrane protein insertase yidc | HSERO_RS21675 | Not Available | Negative | 4962254 - 4963951 | 62031.5 |
| membrane protein insertion efficiency factor yidd | HSERO_RS21680 | Not Available | Negative | 4963968 - 4964330 | 12325.8 |
| ribonuclease p protein component | HSERO_RS21685 | Not Available | Negative | 4964348 - 4964761 | 15679.2 |
| 50s ribosomal protein l34 | HSERO_RS24565 | Not Available | Negative | 4964789 - 4964926 | 5193.54 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


