Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| phosphoenolpyruvate carboxykinase (gtp) | HSERO_RS21550 | Not Available | Negative | 4930659 - 4932527 | 68154.4 |
| hypothetical protein | HSERO_RS24965 | Not Available | Positive | 4932540 - 4933001 | 17121.3 |
| d-2-hydroxyacid dehydrogenase family protein | HSERO_RS21555 | Not Available | Positive | 4933177 - 4934163 | 35508.0 |
| hypothetical protein | HSERO_RS21560 | Not Available | Negative | 4934141 - 4934905 | 29103.8 |
| chemotaxis protein chew | HSERO_RS21565 | Not Available | Positive | 4935251 - 4937890 | 96839.0 |
| asparaginase domain-containing protein | HSERO_RS21570 | Not Available | Positive | 4937973 - 4938458 | 17179.8 |
| lysr family transcriptional regulator | HSERO_RS21575 | Not Available | Negative | 4938478 - 4939380 | 32761.6 |
| yeih family protein | HSERO_RS21580 | Not Available | Positive | 4939514 - 4940563 | 36596.8 |
| srpbcc family protein | HSERO_RS21585 | Not Available | Negative | 4940637 - 4941107 | 18254.7 |
| uvrd-helicase domain-containing protein | HSERO_RS21590 | Not Available | Positive | 4941240 - 4943312 | 78091.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


