Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| spor domain-containing protein | HSERO_RS21500 | Not Available | Negative | 4921019 - 4921798 | 27566.9 |
| type iii pantothenate kinase | HSERO_RS21505 | Not Available | Negative | 4921853 - 4922629 | 27302.0 |
| biotin--[acetyl-coa-carboxylase] ligase | HSERO_RS21510 | Not Available | Negative | 4922626 - 4923504 | 31456.1 |
| vanz family protein | HSERO_RS21515 | Not Available | Positive | 4923618 - 4924760 | 41261.6 |
| (2fe-2s) ferredoxin domain-containing protein | HSERO_RS21520 | Not Available | Positive | 4924832 - 4925152 | 11989.3 |
| alpha/beta hydrolase | HSERO_RS21525 | Not Available | Positive | 4925196 - 4925858 | 23882.8 |
| d-alanyl-d-alanine carboxypeptidase family protein | HSERO_RS21530 | Not Available | Positive | 4926106 - 4927260 | 41898.2 |
| alkyl hydroperoxide reductase subunit f | HSERO_RS21535 | Not Available | Negative | 4927444 - 4929045 | 56702.2 |
| alkyl hydroperoxide reductase subunit c | HSERO_RS21540 | Not Available | Negative | 4929208 - 4929771 | 20684.6 |
| acyl-coa thioesterase | HSERO_RS21545 | Not Available | Positive | 4930128 - 4930580 | 16830.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


