Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipid a biosynthesis acyltransferase | HSERO_RS21450 | Not Available | Positive | 4910580 - 4911464 | 33551.3 |
| diaminopimelate epimerase | HSERO_RS21455 | Not Available | Positive | 4911500 - 4912363 | 30987.0 |
| tetratricopeptide repeat protein | HSERO_RS21460 | Not Available | Negative | 4912446 - 4914044 | 58716.0 |
| porin | HSERO_RS21465 | Not Available | Positive | 4914412 - 4915575 | 39377.0 |
| duf484 family protein | HSERO_RS21470 | Not Available | Positive | 4915786 - 4916454 | 24701.6 |
| tyrosine recombinase xerc | HSERO_RS21475 | Not Available | Positive | 4916495 - 4917487 | 36247.4 |
| fur family transcriptional regulator | HSERO_RS21480 | Not Available | Positive | 4917598 - 4918167 | 20412.9 |
| had-ia family hydrolase | HSERO_RS21485 | Not Available | Negative | 4918181 - 4918918 | 28089.5 |
| trab/gumn family protein | HSERO_RS21490 | Not Available | Positive | 4918998 - 4919909 | 33393.1 |
| acetylglutamate kinase | HSERO_RS21495 | Not Available | Negative | 4920006 - 4920899 | 31818.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


