Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | HSERO_RS21300 | Not Available | Positive | 4878161 - 4878946 | 29564.8 |
| abc transporter permease | HSERO_RS21305 | Not Available | Positive | 4878973 - 4879752 | 27796.9 |
| abc transporter atp-binding protein | HSERO_RS21310 | Not Available | Positive | 4879939 - 4881495 | 56192.3 |
| abc transporter permease | HSERO_RS21315 | Not Available | Positive | 4881488 - 4882582 | 38332.5 |
| abc transporter permease | HSERO_RS21320 | Not Available | Positive | 4882599 - 4883519 | 32098.2 |
| bmp family abc transporter substrate-binding protein | HSERO_RS21325 | Not Available | Positive | 4883592 - 4884731 | 40237.0 |
| higa family addiction module antitoxin | HSERO_RS21330 | Not Available | Negative | 4884833 - 4885108 | 10041.2 |
| type ii toxin-antitoxin system rele/pare family toxin | HSERO_RS21335 | Not Available | Negative | 4885128 - 4885406 | 10329.4 |
| septum site-determining protein minc | HSERO_RS21340 | Not Available | Positive | 4885644 - 4886438 | 27166.3 |
| septum site-determining protein mind | HSERO_RS21345 | Not Available | Positive | 4886521 - 4887336 | 29592.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


