Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter atp-binding protein | HSERO_RS21250 | Not Available | Positive | 4865213 - 4865947 | 26476.6 |
| hypothetical protein | HSERO_RS21255 | Not Available | Negative | 4866319 - 4866864 | 20851.1 |
| adenosine deaminase | HSERO_RS21260 | Not Available | Positive | 4867142 - 4868200 | 38813.0 |
| gntr family transcriptional regulator | HSERO_RS21265 | Not Available | Positive | 4868619 - 4869356 | 27530.1 |
| ncs1 family nucleobase:cation symporter-1 | HSERO_RS21270 | Not Available | Positive | 4869573 - 4871018 | 52325.0 |
| aspartate/glutamate racemase family protein | HSERO_RS21275 | Not Available | Positive | 4871055 - 4871789 | 25715.0 |
| allantoinase puue | HSERO_RS21280 | Not Available | Positive | 4871872 - 4872804 | 35682.1 |
| urate hydroxylase puud | HSERO_RS21285 | Not Available | Negative | 4873727 - 4874962 | 45378.4 |
| porin | HSERO_RS21290 | Not Available | Positive | 4875656 - 4876738 | 37886.7 |
| abc transporter substrate-binding protein | HSERO_RS21295 | Not Available | Positive | 4877028 - 4878062 | 37307.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


