Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gt4 family glycosyltransferase pelf | HSERO_RS21200 | Not Available | Negative | 4849705 - 4851336 | 60516.6 |
| hypothetical protein | HSERO_RS21205 | Not Available | Negative | 4851333 - 4852373 | 38517.7 |
| peld ggdef domain-containing protein | HSERO_RS21210 | Not Available | Negative | 4852363 - 4853838 | 53853.4 |
| hypothetical protein | HSERO_RS21215 | Not Available | Negative | 4853863 - 4854468 | 21045.2 |
| tetratricopeptide repeat protein | HSERO_RS21220 | Not Available | Negative | 4854537 - 4858538 | 147815.0 |
| bifunctional glycoside hydrolase 114/ polysaccharide deacetylase family protein | HSERO_RS21225 | Not Available | Negative | 4858597 - 4861566 | 108691.0 |
| gntr family transcriptional regulator | HSERO_RS21230 | Not Available | Positive | 4862115 - 4862864 | 27057.4 |
| transporter substrate-binding domain-containing protein | HSERO_RS21235 | Not Available | Positive | 4862922 - 4863704 | 27495.6 |
| amino acid abc transporter permease | HSERO_RS21240 | Not Available | Positive | 4863908 - 4864579 | 24496.5 |
| amino acid abc transporter permease | HSERO_RS21245 | Not Available | Positive | 4864576 - 4865232 | 24572.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


