Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sugar transferase | HSERO_RS21105 | Not Available | Positive | 4828194 - 4828754 | 21089.1 |
| polysaccharide biosynthesis protein | HSERO_RS21110 | Not Available | Positive | 4828803 - 4830749 | 70414.5 |
| ompa/motb family protein | HSERO_RS21115 | Not Available | Negative | 4830848 - 4831600 | 25742.7 |
| hypothetical protein | HSERO_RS21120 | Not Available | Negative | 4831597 - 4832286 | 24560.9 |
| malate dehydrogenase (quinone) | HSERO_RS21125 | Not Available | Negative | 4832515 - 4834164 | 60113.1 |
| chemoreceptor glutamine deamidase ched | HSERO_RS21130 | Not Available | Positive | 4834675 - 4835286 | 22299.9 |
| addiction module antidote protein | HSERO_RS21135 | Not Available | Positive | 4835579 - 4836058 | 16976.7 |
| 2-oxo-tetronate isomerase | HSERO_RS21140 | Not Available | Negative | 4836147 - 4836950 | 29252.9 |
| mfs transporter | HSERO_RS21145 | Not Available | Negative | 4837079 - 4838392 | 47343.8 |
| aldolase | HSERO_RS21150 | Not Available | Negative | 4838683 - 4839330 | 23522.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


