Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| proline--trna ligase | HSERO_RS01830 | Not Available | Positive | 402729 - 404456 | 63367.0 |
| hypothetical protein | HSERO_RS01835 | Not Available | Negative | 404543 - 404956 | 14189.7 |
| swib/mdm2 domain-containing protein | HSERO_RS24235 | Not Available | Negative | 405313 - 405840 | 17738.1 |
| signal recognition particle protein | HSERO_RS01850 | Not Available | Negative | 406226 - 407596 | 48841.3 |
| abc transporter substrate-binding protein | HSERO_RS01855 | Not Available | Positive | 407919 - 408878 | 34542.9 |
| abc transporter permease | HSERO_RS01860 | Not Available | Positive | 408898 - 409719 | 29768.4 |
| abc transporter atp-binding protein | HSERO_RS01865 | Not Available | Positive | 409721 - 410530 | 30277.8 |
| cytochrome c assembly family protein | HSERO_RS01870 | Not Available | Positive | 410664 - 411476 | 29896.6 |
| pp0621 family protein | HSERO_RS01875 | Not Available | Positive | 411473 - 411757 | 10178.3 |
| 1,6-anhydro-n-acetylmuramyl-l-alanine amidase ampd | HSERO_RS01880 | Not Available | Positive | 411761 - 412384 | 23152.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


