Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fad-dependent monooxygenase | HSERO_RS20960 | Not Available | Negative | 4796234 - 4797466 | 43814.1 |
| Trna-phe | Not Available | Not Available | Positive | 4797552 - 4797627 | Not Available |
| vi polysaccharide biosynthesis udp-n-acetylglucosamine c-6 dehydrogenase tvib | HSERO_RS20970 | Not Available | Positive | 4798122 - 4799396 | 46814.4 |
| nad-dependent epimerase/dehydratase family protein | HSERO_RS20975 | Not Available | Positive | 4799396 - 4800469 | 40089.5 |
| gfo/idh/moca family protein | HSERO_RS20980 | Not Available | Positive | 4800485 - 4801543 | 39780.7 |
| acyltransferase | HSERO_RS20985 | Not Available | Positive | 4801547 - 4802113 | 20577.4 |
| degt/dnrj/eryc1/strs family aminotransferase | HSERO_RS20990 | Not Available | Positive | 4802122 - 4803210 | 39334.2 |
| nad-dependent epimerase/dehydratase family protein | HSERO_RS20995 | Not Available | Positive | 4803297 - 4804298 | 36789.2 |
| degt/dnrj/eryc1/strs family aminotransferase | HSERO_RS21000 | Not Available | Positive | 4804295 - 4805479 | 43288.5 |
| asparagine synthase (glutamine-hydrolyzing) | HSERO_RS21005 | Not Available | Positive | 4805479 - 4807350 | 71642.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


