Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus secretin pilq | HSERO_RS20915 | Not Available | Positive | 4784366 - 4786390 | 72678.5 |
| bifunctional shikimate kinase/3-dehydroquinate synthase arokb | HSERO_RS20920 | Not Available | Positive | 4786592 - 4788382 | 64248.4 |
| deoxyguanosinetriphosphate triphosphohydrolase | HSERO_RS20925 | Not Available | Positive | 4788384 - 4789535 | 43868.2 |
| hypothetical protein | HSERO_RS24960 | Not Available | Negative | 4789682 - 4789879 | 7133.66 |
| duf5610 domain-containing protein | HSERO_RS20930 | Not Available | Positive | 4789954 - 4790697 | 26230.4 |
| hypothetical protein | HSERO_RS20935 | Not Available | Negative | 4790759 - 4791235 | 17296.3 |
| hypothetical protein | HSERO_RS20940 | Not Available | Negative | 4791315 - 4791740 | 15843.0 |
| tex family protein | HSERO_RS20945 | Not Available | Negative | 4792048 - 4794399 | 86018.8 |
| aminoacyl-trna hydrolase | HSERO_RS20950 | Not Available | Positive | 4794623 - 4795201 | 21136.5 |
| dsbc family protein | HSERO_RS20955 | Not Available | Negative | 4795275 - 4796042 | 27945.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


