Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| branched-chain amino acid abc transporter substrate-binding protein | HSERO_RS20865 | Not Available | Negative | 4773354 - 4774646 | 47042.4 |
| duf3108 domain-containing protein | HSERO_RS20870 | Not Available | Positive | 4774757 - 4775872 | 40695.1 |
| duf3108 domain-containing protein | HSERO_RS20875 | Not Available | Positive | 4776034 - 4776795 | 28254.3 |
| 7-cyano-7-deazaguanine synthase quec | HSERO_RS20880 | Not Available | Positive | 4776891 - 4777640 | 27213.7 |
| serine hydrolase domain-containing protein | HSERO_RS20885 | Not Available | Positive | 4777679 - 4778890 | 44636.2 |
| penicillin-binding protein 1a | HSERO_RS20890 | Not Available | Negative | 4779040 - 4781355 | 85264.9 |
| pilus assembly protein pilm | HSERO_RS20895 | Not Available | Positive | 4781725 - 4782639 | 32628.9 |
| hypothetical protein | HSERO_RS20900 | Not Available | Positive | 4782636 - 4783196 | 19906.3 |
| hypothetical protein | HSERO_RS25385 | Not Available | Positive | 4783193 - 4783843 | 23558.7 |
| hypothetical protein | HSERO_RS20910 | Not Available | Positive | 4783761 - 4784369 | 21617.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


