Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trna (cytidine(34)-2'-o)-methyltransferase | HSERO_RS20815 | Not Available | Positive | 4765067 - 4765549 | 18114.5 |
| abc transporter atp-binding protein | HSERO_RS20820 | Not Available | Negative | 4765611 - 4766405 | 28781.2 |
| abc transporter permease | HSERO_RS20825 | Not Available | Negative | 4766407 - 4767300 | 31252.8 |
| abc transporter substrate-binding protein | HSERO_RS20830 | Not Available | Negative | 4767432 - 4768403 | 33591.7 |
| abc transporter substrate-binding protein | HSERO_RS20835 | Not Available | Negative | 4768537 - 4769517 | 33942.8 |
| hypothetical protein | HSERO_RS20840 | Not Available | Positive | 4769752 - 4770183 | 14784.4 |
| copper chaperone pcu(a)c | HSERO_RS20845 | Not Available | Positive | 4770235 - 4770753 | 18084.9 |
| d-glycero-beta-d-manno-heptose 1-phosphate adenylyltransferase | HSERO_RS20850 | Not Available | Negative | 4770851 - 4771333 | 17288.8 |
| diiron oxygenase | HSERO_RS20855 | Not Available | Negative | 4771456 - 4772310 | 33552.1 |
| pham family polyhydroxyalkanoate granule multifunctional regulatory protein | HSERO_RS20860 | Not Available | Negative | 4772449 - 4773309 | 29749.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


