Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cytochrome c oxidase subunit 3 | HSERO_RS20770 | Not Available | Negative | 4757352 - 4758212 | 32456.7 |
| duf2970 domain-containing protein | HSERO_RS20775 | Not Available | Negative | 4758370 - 4758546 | 6243.86 |
| cytochrome c oxidase assembly protein | HSERO_RS20780 | Not Available | Negative | 4758627 - 4759199 | 21376.7 |
| cytochrome oxidase small assembly protein | HSERO_RS25265 | Not Available | Negative | 4759196 - 4759306 | 4105.26 |
| cytochrome c oxidase subunit i | HSERO_RS20785 | Not Available | Negative | 4759360 - 4760979 | 60300.3 |
| cytochrome c oxidase subunit ii | HSERO_RS20790 | Not Available | Negative | 4760998 - 4762158 | 42320.4 |
| duf2244 domain-containing protein | HSERO_RS20795 | Not Available | Negative | 4762181 - 4762579 | 14627.8 |
| hypothetical protein | HSERO_RS25270 | Not Available | Positive | 4762473 - 4762850 | 14143.2 |
| methyltransferase domain-containing protein | HSERO_RS20805 | Not Available | Negative | 4763062 - 4764006 | 35148.5 |
| comf family protein | HSERO_RS20810 | Not Available | Positive | 4764130 - 4765029 | 31993.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


