Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| fic family protein | HSERO_RS20570 | Not Available | Positive | 4717156 - 4718277 | 41549.9 |
| abc transporter atp-binding protein | HSERO_RS20575 | Not Available | Negative | 4718279 - 4719088 | 28545.7 |
| abc transporter permease subunit | HSERO_RS20580 | Not Available | Negative | 4719085 - 4720875 | 63162.3 |
| branched-chain amino acid abc transporter permease | HSERO_RS20585 | Not Available | Negative | 4720886 - 4721938 | 36872.5 |
| phenylacetic acid degradation bifunctional protein paaz | HSERO_RS20590 | Not Available | Negative | 4722060 - 4724120 | 72919.3 |
| abc transporter substrate-binding protein | HSERO_RS20595 | Not Available | Negative | 4724397 - 4725542 | 40504.1 |
| tetr/acrr family transcriptional regulator | HSERO_RS20600 | Not Available | Negative | 4725615 - 4726235 | 23265.3 |
| phenylacetic acid degradation protein paay | HSERO_RS20605 | Not Available | Positive | 4726541 - 4727143 | 21231.8 |
| 1,2-phenylacetyl-coa epoxidase subunit paaa | HSERO_RS20610 | Not Available | Positive | 4727262 - 4728248 | 37403.5 |
| 1,2-phenylacetyl-coa epoxidase subunit paab | HSERO_RS20615 | Not Available | Positive | 4728335 - 4728619 | 10594.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


