Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| translation initiation factor if-1 | HSERO_RS01780 | Not Available | Positive | 395922 - 396185 | 9923.14 |
| hypothetical protein | HSERO_RS01785 | Not Available | Positive | 396295 - 396546 | 9069.9 |
| Trna-pro | Not Available | Not Available | Positive | 396690 - 396766 | Not Available |
| octaprenyl diphosphate synthase | HSERO_RS01795 | Not Available | Negative | 396783 - 397712 | 33592.0 |
| 50s ribosomal protein l21 | HSERO_RS01800 | Not Available | Positive | 398080 - 398391 | 11317.9 |
| 50s ribosomal protein l27 | HSERO_RS01805 | Not Available | Positive | 398440 - 398697 | 9056.03 |
| obg family gtpase cgta | HSERO_RS01810 | Not Available | Positive | 398901 - 400010 | 40799.6 |
| glutamate 5-kinase | HSERO_RS01815 | Not Available | Positive | 400127 - 401245 | 39704.9 |
| cnp1-like family protein | HSERO_RS01820 | Not Available | Negative | 401333 - 401911 | 21697.7 |
| rna pyrophosphohydrolase | HSERO_RS01825 | Not Available | Negative | 401917 - 402501 | 22822.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


