Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| mfs transporter | HSERO_RS20520 | Not Available | Positive | 4705044 - 4706330 | 46156.0 |
| tim-barrel domain-containing protein | HSERO_RS20525 | Not Available | Positive | 4706347 - 4708758 | 91232.8 |
| porin | HSERO_RS20530 | Not Available | Positive | 4708813 - 4710024 | 41489.5 |
| lysr family transcriptional regulator | HSERO_RS20535 | Not Available | Negative | 4710144 - 4711061 | 34052.2 |
| 5-oxoprolinase subunit pxpa | HSERO_RS20540 | Not Available | Positive | 4711191 - 4711949 | 27290.8 |
| acetyl-coa carboxylase | HSERO_RS20545 | Not Available | Positive | 4711980 - 4712228 | 8769.39 |
| acetyl-coa carboxylase biotin carboxylase subunit | HSERO_RS20550 | Not Available | Positive | 4712239 - 4713627 | 50045.8 |
| 5-oxoprolinase subunit b family protein | HSERO_RS20555 | Not Available | Positive | 4713629 - 4714528 | 33673.1 |
| biotin-dependent carboxyltransferase family protein | HSERO_RS20560 | Not Available | Positive | 4714518 - 4715495 | 35141.0 |
| purine-cytosine permease family protein | HSERO_RS20565 | Not Available | Positive | 4715676 - 4717007 | 48186.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


