Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS20480 | Not Available | Positive | 4694881 - 4695195 | 11424.8 |
| hipa domain-containing protein | HSERO_RS20485 | Not Available | Positive | 4695226 - 4696545 | 48457.9 |
| xre family transcriptional regulator | HSERO_RS20490 | Not Available | Positive | 4696590 - 4696931 | 12658.6 |
| hypothetical protein | HSERO_RS20495 | Not Available | Positive | 4697258 - 4697491 | 8676.37 |
| hypothetical protein | HSERO_RS20500 | Not Available | Positive | 4698079 - 4698540 | 17957.0 |
| tyrosine-type recombinase/integrase | HSERO_RS20505 | Not Available | Positive | 4698545 - 4699810 | 48038.0 |
| site-specific integrase | HSERO_RS20510 | Not Available | Positive | 4699836 - 4701527 | 63983.6 |
| hypothetical protein | HSERO_RS20515 | Not Available | Positive | 4701524 - 4703626 | 78654.1 |
| hypothetical protein | HSERO_RS24540 | Not Available | Positive | 4703607 - 4704062 | 16694.1 |
| type ii toxin-antitoxin system rele/pare family toxin | HSERO_RS24545 | Not Available | Positive | 4704364 - 4704615 | 9330.07 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


