Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter atp-binding protein | HSERO_RS20400 | Not Available | Negative | 4670820 - 4671623 | 28905.1 |
| redox-regulated atpase ychf | HSERO_RS20405 | Not Available | Positive | 4672014 - 4673108 | 39078.3 |
| helix-turn-helix domain-containing protein | HSERO_RS20415 | Not Available | Negative | 4673356 - 4673646 | 11276.4 |
| hypothetical protein | HSERO_RS24530 | Not Available | Negative | 4673741 - 4674280 | 19620.9 |
| helix-turn-helix domain-containing protein | HSERO_RS24930 | Not Available | Positive | 4674459 - 4674794 | 12585.2 |
| atp-binding protein | HSERO_RS20420 | Not Available | Positive | 4674910 - 4676889 | 75701.8 |
| hypothetical protein | HSERO_RS20425 | Not Available | Positive | 4677072 - 4681223 | 155488.0 |
| hypothetical protein | HSERO_RS20430 | Not Available | Positive | 4681317 - 4681934 | 22727.6 |
| duf4113 domain-containing protein | HSERO_RS25455 | Not Available | Positive | 4682333 - 4682437 | 4159.8 |
| hypothetical protein | HSERO_RS20435 | Not Available | Positive | 4682422 - 4682766 | 12907.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


