Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| large conductance mechanosensitive channel protein mscl | HSERO_RS20250 | Not Available | Positive | 4646736 - 4647173 | 15638.5 |
| nif3-like dinuclear metal center hexameric protein | HSERO_RS20255 | Not Available | Negative | 4647187 - 4647951 | 27817.2 |
| do family serine endopeptidase | HSERO_RS20260 | Not Available | Positive | 4647995 - 4649176 | 41738.9 |
| duf2461 domain-containing protein | HSERO_RS20265 | Not Available | Positive | 4649195 - 4649890 | 26449.0 |
| fadr/gntr family transcriptional regulator | HSERO_RS24925 | Not Available | Positive | 4649924 - 4650634 | 25572.5 |
| d-lactate dehydrogenase | HSERO_RS20275 | Not Available | Negative | 4650654 - 4652417 | 65278.3 |
| mfs transporter | HSERO_RS20280 | Not Available | Negative | 4652463 - 4653800 | 47526.4 |
| twin-arginine translocase subunit tatc | HSERO_RS20285 | Not Available | Negative | 4654074 - 4654844 | 27700.0 |
| sec-independent protein translocase protein tatb | HSERO_RS20290 | Not Available | Negative | 4654906 - 4655427 | 18740.5 |
| sec-independent protein translocase subunit tata | HSERO_RS20295 | Not Available | Negative | 4655548 - 4655751 | 7238.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


