Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type ivb secretion system protein icmh/dotu | HSERO_RS20200 | Not Available | Positive | 4638084 - 4638857 | 28694.9 |
| sensor domain-containing diguanylate cyclase | HSERO_RS20205 | Not Available | Positive | 4639153 - 4640658 | 56188.8 |
| hypothetical protein | HSERO_RS20210 | Not Available | Positive | 4640739 - 4641116 | 14073.7 |
| hypothetical protein | HSERO_RS20215 | Not Available | Positive | 4641272 - 4641862 | 21630.1 |
| Trna-thr | Not Available | Not Available | Positive | 4642198 - 4642273 | Not Available |
| clpxp protease specificity-enhancing factor | HSERO_RS20225 | Not Available | Negative | 4642298 - 4642795 | 18000.1 |
| glutathione s-transferase n-terminal domain-containing protein | HSERO_RS20230 | Not Available | Negative | 4642928 - 4643539 | 23822.1 |
| cytochrome c1 | HSERO_RS20235 | Not Available | Negative | 4643638 - 4644402 | 28461.3 |
| cytochrome b | HSERO_RS20240 | Not Available | Negative | 4644426 - 4645832 | 52541.9 |
| ubiquinol-cytochrome c reductase iron-sulfur subunit | HSERO_RS20245 | Not Available | Negative | 4645835 - 4646443 | 21776.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


