Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter permease | HSERO_RS20095 | Not Available | Negative | 4610550 - 4611500 | 32752.2 |
| abc transporter permease | HSERO_RS20100 | Not Available | Negative | 4611497 - 4612450 | 33060.0 |
| atp-binding cassette domain-containing protein | HSERO_RS20105 | Not Available | Negative | 4612489 - 4613997 | 55174.2 |
| substrate-binding domain-containing protein | HSERO_RS20110 | Not Available | Negative | 4614091 - 4615158 | 37363.0 |
| methyl-accepting chemotaxis protein | HSERO_RS25380 | Not Available | Positive | 4615653 - 4617287 | 58257.5 |
| m15 family metallopeptidase | HSERO_RS20120 | Not Available | Positive | 4617749 - 4618588 | 31472.7 |
| type vi secretion system membrane subunit tssm | HSERO_RS20130 | Not Available | Positive | 4619344 - 4623144 | 140602.0 |
| type vi secretion system-associated protein tagf | HSERO_RS20135 | Not Available | Positive | 4623141 - 4624133 | 36466.7 |
| ompa family protein | HSERO_RS20140 | Not Available | Positive | 4624137 - 4624940 | 28557.0 |
| type vi secretion system protein tssa | HSERO_RS20145 | Not Available | Negative | 4625023 - 4626150 | 41131.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


