Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | HSERO_RS20045 | Not Available | Positive | 4599831 - 4600976 | 40094.6 |
| branched-chain amino acid abc transporter permease | HSERO_RS20050 | Not Available | Positive | 4601066 - 4602106 | 36317.5 |
| abc transporter permease subunit | HSERO_RS20055 | Not Available | Positive | 4602103 - 4603896 | 64226.9 |
| abc transporter atp-binding protein | HSERO_RS20060 | Not Available | Positive | 4603893 - 4604648 | 27293.5 |
| duf3237 domain-containing protein | HSERO_RS20065 | Not Available | Positive | 4604707 - 4605258 | 20237.7 |
| acyl-coa dehydrogenase | HSERO_RS20070 | Not Available | Positive | 4605272 - 4607047 | 63903.8 |
| marr family winged helix-turn-helix transcriptional regulator | HSERO_RS20075 | Not Available | Positive | 4607025 - 4607510 | 18151.3 |
| hypothetical protein | HSERO_RS20080 | Not Available | Negative | 4607552 - 4607818 | 9534.44 |
| methyl-accepting chemotaxis protein | HSERO_RS20085 | Not Available | Positive | 4608045 - 4609568 | 53032.4 |
| smp-30/gluconolactonase/lre family protein | HSERO_RS20090 | Not Available | Negative | 4609602 - 4610519 | 33271.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


