Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| coa transferase subunit b | HSERO_RS19995 | Not Available | Negative | 4588457 - 4589098 | 22564.2 |
| 3-oxoacid coa-transferase subunit a | HSERO_RS20000 | Not Available | Negative | 4589095 - 4589769 | 24043.0 |
| iclr family transcriptional regulator domain-containing protein | HSERO_RS20005 | Not Available | Positive | 4590077 - 4590982 | 32395.3 |
| porin | HSERO_RS20010 | Not Available | Negative | 4591137 - 4592234 | 37845.9 |
| abc transporter substrate-binding protein | HSERO_RS20015 | Not Available | Positive | 4592787 - 4593962 | 41968.2 |
| crotonase/enoyl-coa hydratase family protein | HSERO_RS20020 | Not Available | Positive | 4594299 - 4595078 | 27960.8 |
| feruloyl-coa synthase | HSERO_RS20025 | Not Available | Positive | 4595210 - 4597072 | 68018.4 |
| thiolase family protein | HSERO_RS20030 | Not Available | Positive | 4597086 - 4598339 | 44151.0 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS20035 | Not Available | Positive | 4598367 - 4599131 | 26440.2 |
| acyl-coa thioesterase | HSERO_RS20040 | Not Available | Positive | 4599148 - 4599567 | 16034.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


