Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| pdr/vanb family oxidoreductase | HSERO_RS19945 | Not Available | Negative | 4578251 - 4579207 | 33982.5 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HSERO_RS19950 | Not Available | Negative | 4579217 - 4580266 | 39258.6 |
| marr family winged helix-turn-helix transcriptional regulator | HSERO_RS19955 | Not Available | Positive | 4580600 - 4581109 | 18892.8 |
| lysr family transcriptional regulator | HSERO_RS19960 | Not Available | Negative | 4581055 - 4582026 | 35764.8 |
| hd-gyp domain-containing protein | HSERO_RS19965 | Not Available | Positive | 4582359 - 4583591 | 45147.1 |
| abc transporter atp-binding protein | HSERO_RS19970 | Not Available | Negative | 4583639 - 4584340 | 25708.6 |
| abc transporter atp-binding protein | HSERO_RS19975 | Not Available | Negative | 4584333 - 4585106 | 27895.7 |
| branched-chain amino acid abc transporter permease | HSERO_RS19980 | Not Available | Negative | 4585103 - 4586119 | 35894.2 |
| branched-chain amino acid abc transporter permease | HSERO_RS19985 | Not Available | Negative | 4586116 - 4586982 | 30332.4 |
| 3-oxoadipyl-coa thiolase | HSERO_RS19990 | Not Available | Negative | 4587206 - 4588408 | 41937.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


