Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| arac family transcriptional regulator | HSERO_RS19895 | Not Available | Negative | 4566713 - 4567579 | 33029.4 |
| cpbp family intramembrane glutamic endopeptidase | HSERO_RS19900 | Not Available | Positive | 4567734 - 4568591 | 30814.1 |
| 4-hydroxybenzoate 3-monooxygenase | HSERO_RS19905 | Not Available | Negative | 4568663 - 4569829 | 43324.5 |
| helix-turn-helix domain-containing protein | HSERO_RS19910 | Not Available | Positive | 4570050 - 4570961 | 34457.6 |
| iclr family transcriptional regulator domain-containing protein | HSERO_RS19915 | Not Available | Negative | 4571071 - 4571871 | 29124.6 |
| protocatechuate 3,4-dioxygenase subunit beta | HSERO_RS19920 | Not Available | Positive | 4572141 - 4572833 | 26192.3 |
| protocatechuate 3,4-dioxygenase | HSERO_RS19925 | Not Available | Positive | 4572853 - 4573365 | 18488.7 |
| 3-carboxy-cis,cis-muconate cycloisomerase | HSERO_RS19930 | Not Available | Positive | 4573466 - 4574833 | 48458.9 |
| 3-oxoadipate enol-lactonase | HSERO_RS19935 | Not Available | Positive | 4574886 - 4576148 | 45185.9 |
| abc transporter substrate-binding protein | HSERO_RS19940 | Not Available | Negative | 4577013 - 4578197 | 41802.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


