Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lipopolysaccharide transport periplasmic protein lpta | HSERO_RS19845 | Not Available | Positive | 4556501 - 4557106 | 22051.2 |
| lps export abc transporter atp-binding protein | HSERO_RS19850 | Not Available | Positive | 4557108 - 4557851 | 27308.1 |
| rna polymerase factor sigma-54 | HSERO_RS19855 | Not Available | Positive | 4557924 - 4559414 | 55044.7 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | HSERO_RS19860 | Not Available | Positive | 4559568 - 4559931 | 13440.2 |
| grx4 family monothiol glutaredoxin | HSERO_RS19865 | Not Available | Positive | 4560263 - 4560574 | 11272.6 |
| ubix family flavin prenyltransferase | HSERO_RS19870 | Not Available | Positive | 4560598 - 4561200 | 21829.8 |
| sdr family oxidoreductase | HSERO_RS19875 | Not Available | Negative | 4561291 - 4562058 | 27171.8 |
| alpha-ketoglutarate dehydrogenase | HSERO_RS19880 | Not Available | Negative | 4562213 - 4564894 | 98880.9 |
| lrp/asnc family transcriptional regulator | HSERO_RS19885 | Not Available | Positive | 4565211 - 4565690 | 17929.0 |
| response regulator | HSERO_RS19890 | Not Available | Negative | 4566029 - 4566559 | 19314.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


