Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| helix-turn-helix domain-containing protein | HSERO_RS19745 | Not Available | Negative | 4529362 - 4530348 | 37267.8 |
| hypothetical protein | HSERO_RS19750 | Not Available | Negative | 4530542 - 4530853 | 11832.8 |
| aldehyde dehydrogenase family protein | HSERO_RS19755 | Not Available | Positive | 4530852 - 4532306 | 50833.0 |
| alanine racemase | HSERO_RS19760 | Not Available | Positive | 4532389 - 4533495 | 39693.9 |
| apc family permease | HSERO_RS19765 | Not Available | Negative | 4533591 - 4535048 | 51637.3 |
| hypothetical protein | HSERO_RS19770 | Not Available | Negative | 4535378 - 4535650 | 10678.0 |
| efflux rnd transporter permease subunit | HSERO_RS19775 | Not Available | Negative | 4535647 - 4538748 | 110023.0 |
| response regulator | HSERO_RS19780 | Not Available | Positive | 4538926 - 4539666 | 27016.7 |
| atp-binding protein | HSERO_RS19785 | Not Available | Positive | 4539677 - 4540762 | 39502.1 |
| branched-chain amino acid abc transporter substrate-binding protein | HSERO_RS19790 | Not Available | Positive | 4540889 - 4542046 | 41813.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


