Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4312 genes
Non-Coding Genes
588 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Gp59 | HSERO_RS01150 | Not Available | Positive | 238395 - 239696 | 46590.7 |
| metal-dependent hydrolase family protein | HSERO_RS01155 | Not Available | Positive | 239705 - 240934 | 43099.0 |
| Gp58 | HSERO_RS01160 | Not Available | Positive | 241053 - 241958 | 33978.2 |
| Attl | Not Available | Not Available | Positive | 967780 - 967802 | Not Available |
| Putative integrase | HSERO_RS24290 | Not Available | Negative | 970186 - 971163 | 37494.2 |
| helix-turn-helix domain-containing protein | HSERO_RS25400 | Not Available | Negative | 971178 - 971345 | 5987.32 |
| hypothetical protein | HSERO_RS04380 | Not Available | Negative | 971320 - 971703 | 13831.1 |
| hypothetical protein | HSERO_RS25005 | Not Available | Negative | 971700 - 971846 | 5126.17 |
| Gp15, hypothetical replication protein | HSERO_RS04385 | Not Available | Negative | 971843 - 973894 | 76768.6 |
| hypothetical protein | HSERO_RS04390 | Not Available | Negative | 973884 - 974237 | 13103.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


