Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| bifunctional dna-formamidopyrimidine glycosylase/dna-(apurinic or apyrimidinic site) lyase | HSERO_RS19545 | Not Available | Negative | 4479457 - 4480278 | 30466.1 |
| tetratricopeptide repeat protein | HSERO_RS19550 | Not Available | Positive | 4480476 - 4482278 | 66746.7 |
| lipoprotein insertase outer membrane protein lolb | HSERO_RS19555 | Not Available | Positive | 4482275 - 4482907 | 22572.7 |
| 4-(cytidine 5'-diphospho)-2-c-methyl-d-erythritol kinase | HSERO_RS19560 | Not Available | Positive | 4482962 - 4483831 | 31338.8 |
| Trna-gln | Not Available | Not Available | Positive | 4483909 - 4483985 | Not Available |
| ribose-phosphate pyrophosphokinase | HSERO_RS19570 | Not Available | Positive | 4484113 - 4485063 | 34252.8 |
| 50s ribosomal protein l25/general stress protein ctc | HSERO_RS19575 | Not Available | Positive | 4485213 - 4485821 | 21656.1 |
| spfh domain-containing protein | HSERO_RS19580 | Not Available | Negative | 4485930 - 4487399 | 52317.7 |
| m61 family metallopeptidase | HSERO_RS19585 | Not Available | Negative | 4487596 - 4489392 | 66815.7 |
| glutamate synthase subunit beta | HSERO_RS19590 | Not Available | Negative | 4489619 - 4491082 | 53103.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


