Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf3683 domain-containing protein | HSERO_RS19500 | Not Available | Negative | 4466785 - 4470786 | 148191.0 |
| hypothetical protein | HSERO_RS25100 | Not Available | Positive | 4471165 - 4471302 | 4766.94 |
| yqaa family protein | HSERO_RS19505 | Not Available | Negative | 4471372 - 4471863 | 18301.8 |
| threonine ammonia-lyase, biosynthetic | HSERO_RS19510 | Not Available | Positive | 4472201 - 4473736 | 56026.8 |
| nadph-dependent 7-cyano-7-deazaguanine reductase quef | HSERO_RS19515 | Not Available | Positive | 4473820 - 4474695 | 32469.3 |
| hypothetical protein | HSERO_RS19520 | Not Available | Positive | 4475030 - 4475644 | 22702.1 |
| pts sugar transporter subunit iia | HSERO_RS19525 | Not Available | Positive | 4475933 - 4476406 | 17190.8 |
| hpr(ser) kinase/phosphatase | HSERO_RS19530 | Not Available | Positive | 4476453 - 4477391 | 34459.0 |
| rnase adapter rapz | HSERO_RS19535 | Not Available | Positive | 4477469 - 4478371 | 33602.2 |
| a/g-specific adenine glycosylase | HSERO_RS19540 | Not Available | Negative | 4478324 - 4479460 | 41467.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


