Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| indole-3-glycerol phosphate synthase trpc | HSERO_RS19450 | Not Available | Positive | 4457215 - 4458015 | 29434.5 |
| 3-oxoacyl-acp reductase family protein | HSERO_RS19455 | Not Available | Negative | 4458100 - 4458873 | 26260.4 |
| lysr family transcriptional regulator | HSERO_RS19460 | Not Available | Positive | 4459038 - 4459964 | 33039.8 |
| mfs transporter | HSERO_RS19465 | Not Available | Negative | 4459972 - 4461468 | 53023.6 |
| ubiquinone biosynthesis regulatory protein kinase ubib | HSERO_RS19470 | Not Available | Negative | 4461550 - 4463124 | 60284.4 |
| ubiquinone biosynthesis accessory factor ubij | HSERO_RS19475 | Not Available | Negative | 4463124 - 4463732 | 22253.8 |
| tim44 domain-containing protein | HSERO_RS19480 | Not Available | Negative | 4463928 - 4464881 | 33304.1 |
| bifunctional demethylmenaquinone methyltransferase/2-methoxy-6-polyprenyl-1,4-benzoquinol methylase ubie | HSERO_RS19485 | Not Available | Negative | 4465010 - 4465744 | 27535.4 |
| gamma-butyrobetaine hydroxylase-like domain-containing protein | HSERO_RS19490 | Not Available | Negative | 4465829 - 4466251 | 15326.0 |
| hit family protein | HSERO_RS19495 | Not Available | Negative | 4466329 - 4466781 | 16662.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


