Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| uxaa family hydrolase | HSERO_RS19355 | Not Available | Positive | 4436989 - 4438524 | 54447.9 |
| fumarylacetoacetate hydrolase family protein | HSERO_RS19360 | Not Available | Positive | 4438700 - 4439875 | 41773.8 |
| sdr family oxidoreductase | HSERO_RS19365 | Not Available | Positive | 4439892 - 4440656 | 26301.5 |
| smp-30/gluconolactonase/lre family protein | HSERO_RS19370 | Not Available | Positive | 4440800 - 4441708 | 33195.1 |
| acyloxyacyl hydrolase | HSERO_RS19375 | Not Available | Positive | 4441878 - 4442432 | 20130.8 |
| 5s ribosomal rna | Not Available | Not Available | Positive | 4442916 - 4443028 | Not Available |
| 23s ribosomal rna | Not Available | Not Available | Positive | 4443166 - 4446040 | Not Available |
| Trna-ala | Not Available | Not Available | Positive | 4446324 - 4446399 | Not Available |
| Trna-ile | Not Available | Not Available | Positive | 4446407 - 4446483 | Not Available |
| 16s ribosomal rna | Not Available | Not Available | Positive | 4446602 - 4448136 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


