Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | HSERO_RS19305 | Not Available | Negative | 4428528 - 4428992 | 17848.6 |
| duf1304 domain-containing protein | HSERO_RS19310 | Not Available | Positive | 4429292 - 4429642 | 12518.7 |
| duf4088 domain-containing protein | HSERO_RS19315 | Not Available | Positive | 4429775 - 4430494 | 27131.6 |
| duf3047 domain-containing protein | HSERO_RS19320 | Not Available | Negative | 4430609 - 4431406 | 29308.9 |
| lysr family transcriptional regulator | HSERO_RS19325 | Not Available | Negative | 4431627 - 4432601 | 35858.8 |
| arad1 family protein | HSERO_RS19330 | Not Available | Positive | 4432815 - 4433810 | 36495.5 |
| amino acid abc transporter permease | HSERO_RS19335 | Not Available | Positive | 4433973 - 4434656 | 24967.9 |
| amino acid abc transporter permease | HSERO_RS19340 | Not Available | Positive | 4434666 - 4435316 | 23528.3 |
| amino acid abc transporter atp-binding protein | HSERO_RS19345 | Not Available | Positive | 4435300 - 4436034 | 26835.9 |
| transporter substrate-binding domain-containing protein | HSERO_RS19350 | Not Available | Positive | 4436093 - 4436899 | 28621.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


