Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| amino acid abc transporter substrate-binding protein | HSERO_RS19255 | Not Available | Negative | 4414291 - 4415238 | 33912.0 |
| glu/leu/phe/val family dehydrogenase | HSERO_RS19260 | Not Available | Negative | 4416099 - 4417391 | 46452.7 |
| lysr family transcriptional regulator | HSERO_RS19265 | Not Available | Negative | 4417728 - 4418723 | 37178.5 |
| abcb family abc transporter atp-binding protein/permease | HSERO_RS19270 | Not Available | Negative | 4418799 - 4420703 | 70450.3 |
| acyl-coa thioesterase | HSERO_RS19275 | Not Available | Positive | 4420856 - 4421290 | 15611.8 |
| 2-hydroxyacid dehydrogenase | HSERO_RS19280 | Not Available | Positive | 4421413 - 4422363 | 33576.6 |
| long-chain-fatty-acid--coa ligase | HSERO_RS19285 | Not Available | Negative | 4422449 - 4424149 | 61942.3 |
| molybdopterin-containing oxidoreductase family protein | HSERO_RS19290 | Not Available | Negative | 4424450 - 4426555 | 75985.7 |
| helix-turn-helix transcriptional regulator | HSERO_RS19295 | Not Available | Positive | 4426734 - 4427543 | 30016.9 |
| lyse family translocator | HSERO_RS19300 | Not Available | Negative | 4427548 - 4428171 | 21839.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


