Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| zip family metal transporter | HSERO_RS19160 | Not Available | Negative | 4396032 - 4396790 | 27138.6 |
| chemotaxis protein chea | HSERO_RS19165 | Not Available | Negative | 4396865 - 4399021 | 76717.8 |
| methyl-accepting chemotaxis protein | HSERO_RS19170 | Not Available | Negative | 4399116 - 4401323 | 80212.4 |
| chemotaxis protein chew | HSERO_RS19175 | Not Available | Negative | 4401410 - 4401994 | 20604.7 |
| rubredoxin | HSERO_RS19180 | Not Available | Negative | 4402475 - 4402627 | 5617.63 |
| bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase | HSERO_RS19185 | Not Available | Positive | 4402723 - 4403571 | 30069.9 |
| glutamate-1-semialdehyde 2,1-aminomutase | HSERO_RS19190 | Not Available | Positive | 4403602 - 4404885 | 45176.9 |
| iron-sulfur cluster insertion protein erpa | HSERO_RS19195 | Not Available | Negative | 4405003 - 4405368 | 13035.2 |
| bactofilin family protein | HSERO_RS19200 | Not Available | Negative | 4405440 - 4405835 | 13780.6 |
| duf6776 family protein | HSERO_RS19205 | Not Available | Negative | 4405845 - 4406555 | 25820.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


