Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| lysr substrate-binding domain-containing protein | HSERO_RS19110 | Not Available | Negative | 4384654 - 4385544 | 33662.7 |
| fad-binding oxidoreductase | HSERO_RS19115 | Not Available | Negative | 4385787 - 4387202 | 51000.2 |
| cob(i)yrinic acid a,c-diamide adenosyltransferase | HSERO_RS19120 | Not Available | Positive | 4387507 - 4388061 | 19963.1 |
| 1-deoxy-d-xylulose-5-phosphate synthase | HSERO_RS19125 | Not Available | Negative | 4388197 - 4390062 | 66665.2 |
| polyprenyl synthetase family protein | HSERO_RS19130 | Not Available | Negative | 4390150 - 4391097 | 32955.9 |
| exodeoxyribonuclease vii small subunit | HSERO_RS19135 | Not Available | Negative | 4391094 - 4391372 | 9689.48 |
| aromatic ring-hydroxylating oxygenase subunit alpha | HSERO_RS19140 | Not Available | Positive | 4391652 - 4392776 | 42945.9 |
| dmt family transporter | HSERO_RS19145 | Not Available | Positive | 4392992 - 4393909 | 33094.0 |
| sulfurtransferase | HSERO_RS19150 | Not Available | Positive | 4393960 - 4394817 | 30724.4 |
| lysr family transcriptional regulator | HSERO_RS19155 | Not Available | Negative | 4394834 - 4395757 | 33600.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


