Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| cell division protein ftsl | HSERO_RS01630 | Not Available | Positive | 361334 - 361606 | 9859.11 |
| peptidoglycan d,d-transpeptidase ftsi family protein | HSERO_RS01635 | Not Available | Positive | 361603 - 363381 | 64193.9 |
| udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2, 6-diaminopimelate ligase | HSERO_RS01640 | Not Available | Positive | 363381 - 364907 | 53846.3 |
| udp-n-acetylmuramoyl-tripeptide--d-alanyl-d- alanine ligase | HSERO_RS01645 | Not Available | Positive | 364904 - 366364 | 51234.4 |
| phospho-n-acetylmuramoyl-pentapeptide- transferase | HSERO_RS01650 | Not Available | Positive | 366366 - 367535 | 42915.8 |
| udp-n-acetylmuramoyl-l-alanine--d-glutamate ligase | HSERO_RS01655 | Not Available | Positive | 367630 - 369762 | 74466.1 |
| putative lipid ii flippase ftsw | HSERO_RS01660 | Not Available | Positive | 369759 - 371024 | 45852.7 |
| undecaprenyldiphospho-muramoylpentapeptide beta-n-acetylglucosaminyltransferase | HSERO_RS01665 | Not Available | Positive | 371021 - 372103 | 38251.9 |
| udp-n-acetylmuramate--l-alanine ligase | HSERO_RS01670 | Not Available | Positive | 372100 - 373527 | 50434.4 |
| d-alanine--d-alanine ligase | HSERO_RS01675 | Not Available | Positive | 373524 - 374528 | 36594.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


