Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| trap transporter large permease subunit | HSERO_RS19060 | Not Available | Negative | 4370785 - 4372668 | 65791.5 |
| trap transporter substrate-binding protein | HSERO_RS19065 | Not Available | Negative | 4372829 - 4373863 | 38156.8 |
| acetyl-coa acetyltransferase | HSERO_RS19070 | Not Available | Positive | 4374617 - 4375798 | 41577.8 |
| acyl-coa synthetase | HSERO_RS19075 | Not Available | Positive | 4375937 - 4377553 | 59174.7 |
| hypothetical protein | HSERO_RS19080 | Not Available | Positive | 4377550 - 4378119 | 20462.5 |
| ppc domain-containing dna-binding protein | HSERO_RS19085 | Not Available | Positive | 4378122 - 4378574 | 16207.4 |
| dicarboxylate/amino acid:cation symporter | HSERO_RS19090 | Not Available | Negative | 4378902 - 4380197 | 46477.2 |
| glycolate oxidase subunit glcf | HSERO_RS19095 | Not Available | Negative | 4380559 - 4381803 | 45930.6 |
| glycolate oxidase subunit glce | HSERO_RS19100 | Not Available | Negative | 4381829 - 4382908 | 38123.6 |
| fad-linked oxidase c-terminal domain-containing protein | HSERO_RS19105 | Not Available | Negative | 4382911 - 4384398 | 53176.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


