Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| ketol-acid reductoisomerase | HSERO_RS19010 | Not Available | Negative | 4358635 - 4359651 | 36555.8 |
| sigma-54-dependent fis family transcriptional regulator | HSERO_RS19015 | Not Available | Negative | 4359701 - 4360858 | 42722.3 |
| lysr family transcriptional regulator | HSERO_RS19020 | Not Available | Positive | 4361049 - 4361951 | 33664.8 |
| duf6708 domain-containing protein | HSERO_RS19025 | Not Available | Negative | 4361973 - 4363082 | 43108.7 |
| duf6708 domain-containing protein | HSERO_RS19030 | Not Available | Negative | 4363075 - 4364154 | 42092.7 |
| duf6708 domain-containing protein | HSERO_RS19035 | Not Available | Negative | 4364147 - 4365235 | 42846.4 |
| duf6708 domain-containing protein | HSERO_RS19040 | Not Available | Negative | 4365228 - 4366310 | 42018.2 |
| t6ss effector bth_i2691 family protein | HSERO_RS19045 | Not Available | Negative | 4366313 - 4368814 | 90820.6 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS19050 | Not Available | Negative | 4369087 - 4369887 | 28434.5 |
| sdr family nad(p)-dependent oxidoreductase | HSERO_RS19055 | Not Available | Negative | 4369898 - 4370668 | 26894.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


