Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 4-hydroxybenzoate octaprenyltransferase | HSERO_RS18960 | Not Available | Positive | 4351672 - 4352526 | 31478.3 |
| thiopurine s-methyltransferase | HSERO_RS18965 | Not Available | Positive | 4352556 - 4353215 | 24827.8 |
| brna antitoxin family protein | HSERO_RS18970 | Not Available | Negative | 4353264 - 4353626 | 13485.2 |
| hypothetical protein | HSERO_RS18975 | Not Available | Negative | 4353665 - 4353955 | 10850.1 |
| hypothetical protein | HSERO_RS18980 | Not Available | Negative | 4354239 - 4354466 | 8343.05 |
| peptidoglycan dd-metalloendopeptidase family protein | HSERO_RS18985 | Not Available | Negative | 4354502 - 4355266 | 26773.9 |
| pyrroline-5-carboxylate reductase | HSERO_RS18990 | Not Available | Negative | 4355266 - 4356078 | 27892.8 |
| yggs family pyridoxal phosphate-dependent enzyme | HSERO_RS18995 | Not Available | Negative | 4356126 - 4356827 | 24557.6 |
| type iv pilus twitching motility protein pilt | HSERO_RS19000 | Not Available | Positive | 4356910 - 4357965 | 37366.7 |
| glutathione peroxidase | HSERO_RS19005 | Not Available | Positive | 4358014 - 4358499 | 17907.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


