Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gmc family oxidoreductase | HSERO_RS18755 | Not Available | Positive | 4304641 - 4306272 | 59253.7 |
| cytochrome c | HSERO_RS18760 | Not Available | Positive | 4306281 - 4307780 | 53050.3 |
| transcriptional regulator | HSERO_RS18770 | Not Available | Positive | 4308065 - 4308292 | 8494.38 |
| type ii toxin-antitoxin system death-on-curing family toxin | HSERO_RS18775 | Not Available | Positive | 4308289 - 4308672 | 14132.9 |
| mfs transporter | HSERO_RS18780 | Not Available | Negative | 4308783 - 4310180 | 50568.1 |
| porin | HSERO_RS18785 | Not Available | Negative | 4310257 - 4311399 | 40946.0 |
| sugar phosphate isomerase/epimerase family protein | HSERO_RS18790 | Not Available | Negative | 4311680 - 4312552 | 32414.0 |
| shikimate dehydrogenase family protein | HSERO_RS18795 | Not Available | Negative | 4312549 - 4313394 | 30217.8 |
| 4-hydroxyphenylpyruvate dioxygenase | HSERO_RS18800 | Not Available | Negative | 4313399 - 4314280 | 32780.2 |
| iclr family transcriptional regulator domain-containing protein | HSERO_RS18805 | Not Available | Positive | 4314410 - 4315192 | 28706.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


