Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Betaproteobacteria
Order
Burkholderiales
Family
Oxalobacteraceae
Genus
Herbaspirillum
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Betaproteobacteria |
| Order | Burkholderiales |
| Family | Oxalobacteraceae |
| Genus | Herbaspirillum |
| Species | Herbaspirillum seropedicae |
| Strain | SmR1 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | Spirilla |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

AI-generated image based on bacteria physiology
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Aerobic |
| Optimal temperature | Not Available |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Setaria viridis |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | No |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
4759 genes
Non-Coding Genes
139 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| diguanylate cyclase | HSERO_RS18655 | Not Available | Positive | 4284671 - 4285633 | 35406.7 |
| response regulator transcription factor | HSERO_RS18660 | Not Available | Positive | 4286039 - 4286626 | 21318.8 |
| ggdef domain-containing protein | HSERO_RS18665 | Not Available | Negative | 4286685 - 4287407 | 26566.7 |
| duf1987 domain-containing protein | HSERO_RS18670 | Not Available | Negative | 4287404 - 4287796 | 14605.7 |
| siab family protein kinase | HSERO_RS18675 | Not Available | Negative | 4287839 - 4288402 | 21108.1 |
| pp2c family protein-serine/threonine phosphatase | HSERO_RS18680 | Not Available | Negative | 4288399 - 4289667 | 46505.8 |
| hypothetical protein | HSERO_RS18685 | Not Available | Negative | 4289812 - 4290486 | 25562.7 |
| sdr family oxidoreductase | HSERO_RS18690 | Not Available | Positive | 4290828 - 4291688 | 30529.2 |
| hypothetical protein | HSERO_RS18695 | Not Available | Positive | 4291735 - 4292130 | 13949.5 |
| response regulator | HSERO_RS18700 | Not Available | Positive | 4292213 - 4292572 | 13077.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


